Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 AC068338.2-201ENST00000563278 1430 ntBASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATP13A1Q9HD20 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 AC091799.1-201ENST00000422823 811 ntBASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 AL591742.1-201ENST00000604433 565 ntBASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 AC005229.4-201ENST00000610085 2198 ntBASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A1Q9HD20 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 CYP2T1P-201ENST00000432607 1285 ntBASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 AL050303.2-201ENST00000619798 666 ntBASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 AF106564.1-201ENST00000607058 2553 ntBASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP13A1Q9HD20 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ATP13A1Q9HD20 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms