Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VAT1LQ9HCJ6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VAT1LQ9HCJ6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 GUSBP6-202ENST00000438529 1198 ntBASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 AC069236.1-201ENST00000604339 616 ntBASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VAT1LQ9HCJ6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.05■■□□□ 1.44
VAT1LQ9HCJ6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 SLC29A4P1-201ENST00000398760 971 ntBASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 AL138781.1-201ENST00000566567 1274 ntBASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 OR10C1-204ENST00000622521 1039 ntBASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VAT1LQ9HCJ6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
VAT1LQ9HCJ6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 RARRES2P4-201ENST00000514074 484 ntBASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 AL024507.2-201ENST00000606070 2574 ntBASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VAT1LQ9HCJ6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 MKRN4P-201ENST00000444706 1521 ntBASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VAT1LQ9HCJ6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 CDV3P1-201ENST00000471403 739 ntBASIC24■■□□□ 1.43
VAT1LQ9HCJ6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24■■□□□ 1.43
VAT1LQ9HCJ6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms