Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42EP4Q9H3Q1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 RNF165-205ENST00000588679 2904 ntBASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC42EP4Q9H3Q1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 AC009237.3-201ENST00000393279 1427 ntBASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42EP4Q9H3Q1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
CDC42EP4Q9H3Q1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42EP4Q9H3Q1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42EP4Q9H3Q1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.08■□□□□ 0.96
CDC42EP4Q9H3Q1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42EP4Q9H3Q1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42EP4Q9H3Q1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 BX842568.3-201ENST00000418104 571 ntBASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42EP4Q9H3Q1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 AC011484.1-201ENST00000377652 1995 ntBASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms