Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.39■■□□□ 1.66
RTFDC1Q9BY42 AC068473.5-201ENST00000616428 2072 ntBASIC25.39■■□□□ 1.65
RTFDC1Q9BY42 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
RTFDC1Q9BY42 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.39■■□□□ 1.65
RTFDC1Q9BY42 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 ECEL1P3-201ENST00000427961 737 ntBASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 AC105020.6-201ENST00000621523 1217 ntBASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.38■■□□□ 1.65
RTFDC1Q9BY42 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.37■■□□□ 1.65
RTFDC1Q9BY42 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 AC010542.4-201ENST00000563151 1910 ntBASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.36■■□□□ 1.65
RTFDC1Q9BY42 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 AC211429.1-201ENST00000415277 523 ntBASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 REXO1L12P-201ENST00000622156 912 ntBASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTFDC1Q9BY42 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTFDC1Q9BY42 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 AC012618.2-201ENST00000428058 849 ntBASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 FAM210CP-201ENST00000445714 574 ntBASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms