Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 AC098934.4-201ENST00000564127 592 ntBASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM47Q9BQJ4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
TMEM47Q9BQJ4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
TMEM47Q9BQJ4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TMEM47Q9BQJ4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 AC116050.2-201ENST00000612102 1779 ntBASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TMEM47Q9BQJ4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 BX276092.2-201ENST00000417668 665 ntBASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM47Q9BQJ4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM47Q9BQJ4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 AL355472.2-201ENST00000422958 438 ntBASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 AC069152.1-201ENST00000438030 544 ntBASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM47Q9BQJ4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 FEM1AP4-201ENST00000443167 1987 ntBASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 AC073210.2-201ENST00000430369 194 ntBASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM47Q9BQJ4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
TMEM47Q9BQJ4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TMEM47Q9BQJ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.14■■□□□ 1.46
TMEM47Q9BQJ4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
TMEM47Q9BQJ4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.14■■□□□ 1.45
TMEM47Q9BQJ4 AC100791.3-201ENST00000617619 330 ntBASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms