Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.44■□□□□ 0.7
TREX2Q9BQ50 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 KRT18P61-201ENST00000585825 1298 ntBASIC19.44■□□□□ 0.7
TREX2Q9BQ50 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TREX2Q9BQ50 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.44■□□□□ 0.7
TREX2Q9BQ50 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 PLK5-205ENST00000642079 1969 ntBASIC19.43■□□□□ 0.7
TREX2Q9BQ50 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.43■□□□□ 0.7
TREX2Q9BQ50 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 CDCA4P2-201ENST00000441182 718 ntBASIC19.42■□□□□ 0.7
TREX2Q9BQ50 LINC01521-201ENST00000504184 1943 ntBASIC19.42■□□□□ 0.7
TREX2Q9BQ50 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 AC006128.1-201ENST00000624704 1661 ntBASIC19.42■□□□□ 0.7
TREX2Q9BQ50 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TREX2Q9BQ50 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 AC073130.3-201ENST00000624389 2278 ntBASIC19.41■□□□□ 0.7
TREX2Q9BQ50 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TREX2Q9BQ50 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 EEF1DP3-203ENST00000566025 782 ntBASIC19.4■□□□□ 0.7
TREX2Q9BQ50 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 TPRG1LP1-201ENST00000598702 760 ntBASIC19.4■□□□□ 0.7
TREX2Q9BQ50 AC073111.5-205ENST00000641717 521 ntBASIC19.4■□□□□ 0.7
TREX2Q9BQ50 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 FEM1AP1-201ENST00000431297 1995 ntBASIC19.4■□□□□ 0.7
TREX2Q9BQ50 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TREX2Q9BQ50 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TREX2Q9BQ50 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.39■□□□□ 0.7
TREX2Q9BQ50 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms