Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF6BQ99941 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF6BQ99941 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF6BQ99941 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF6BQ99941 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF6BQ99941 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.53■□□□□ 0.56
ATF6BQ99941 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF6BQ99941 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ATF6BQ99941 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF6BQ99941 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF6BQ99941 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.52■□□□□ 0.56
ATF6BQ99941 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
ATF6BQ99941 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF6BQ99941 AC005224.4-201ENST00000583262 1652 ntBASIC18.52■□□□□ 0.56
ATF6BQ99941 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ATF6BQ99941 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF6BQ99941 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
ATF6BQ99941 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.52■□□□□ 0.55
ATF6BQ99941 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATF6BQ99941 PCDHAC2-203ENST00000615316 3011 ntBASIC18.52■□□□□ 0.55
ATF6BQ99941 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.52■□□□□ 0.55
ATF6BQ99941 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.51■□□□□ 0.55
ATF6BQ99941 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATF6BQ99941 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.51■□□□□ 0.55
ATF6BQ99941 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.51■□□□□ 0.55
ATF6BQ99941 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.51■□□□□ 0.55
ATF6BQ99941 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.51■□□□□ 0.55
ATF6BQ99941 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.51■□□□□ 0.55
ATF6BQ99941 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.51■□□□□ 0.55
ATF6BQ99941 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.51■□□□□ 0.55
ATF6BQ99941 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.51■□□□□ 0.55
ATF6BQ99941 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.51■□□□□ 0.55
ATF6BQ99941 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 AC055733.4-201ENST00000638462 1354 ntBASIC18.51■□□□□ 0.55
ATF6BQ99941 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.51■□□□□ 0.55
ATF6BQ99941 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATF6BQ99941 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.5■□□□□ 0.55
ATF6BQ99941 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.5■□□□□ 0.55
ATF6BQ99941 AC012414.1-201ENST00000556676 535 ntBASIC18.5■□□□□ 0.55
ATF6BQ99941 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 AC006128.1-201ENST00000624704 1661 ntBASIC18.5■□□□□ 0.55
ATF6BQ99941 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.5■□□□□ 0.55
ATF6BQ99941 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ATF6BQ99941 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF6BQ99941 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.5■□□□□ 0.55
ATF6BQ99941 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATF6BQ99941 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms