Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 CYP2D8P-201ENST00000433633 1490 ntBASIC18.34■□□□□ 0.53
COL12A1Q99715 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL12A1Q99715 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.34■□□□□ 0.53
COL12A1Q99715 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.34■□□□□ 0.53
COL12A1Q99715 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.34■□□□□ 0.53
COL12A1Q99715 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL12A1Q99715 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL12A1Q99715 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL12A1Q99715 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.33■□□□□ 0.53
COL12A1Q99715 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL12A1Q99715 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL12A1Q99715 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.33■□□□□ 0.53
COL12A1Q99715 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.33■□□□□ 0.52
COL12A1Q99715 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL12A1Q99715 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.33■□□□□ 0.52
COL12A1Q99715 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL12A1Q99715 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL12A1Q99715 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL12A1Q99715 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL12A1Q99715 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL12A1Q99715 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
COL12A1Q99715 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL12A1Q99715 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL12A1Q99715 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.32■□□□□ 0.52
COL12A1Q99715 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL12A1Q99715 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL12A1Q99715 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.32■□□□□ 0.52
COL12A1Q99715 AC061975.6-201ENST00000579045 1553 ntBASIC18.32■□□□□ 0.52
COL12A1Q99715 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.31■□□□□ 0.52
COL12A1Q99715 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL12A1Q99715 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL12A1Q99715 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
COL12A1Q99715 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.31■□□□□ 0.52
COL12A1Q99715 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.31■□□□□ 0.52
COL12A1Q99715 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 MMP23A-201ENST00000234610 1017 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 LINC01124-201ENST00000409786 2117 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.31■□□□□ 0.52
COL12A1Q99715 AC006557.6-201ENST00000623071 864 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.31■□□□□ 0.52
COL12A1Q99715 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.31■□□□□ 0.52
COL12A1Q99715 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL12A1Q99715 AC091076.1-201ENST00000610741 619 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 GPALPP1-207ENST00000611650 899 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 REXO1L10P-201ENST00000615707 1290 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 AC120498.10-201ENST00000621827 505 ntBASIC18.31■□□□□ 0.52
COL12A1Q99715 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
COL12A1Q99715 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL12A1Q99715 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL12A1Q99715 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL12A1Q99715 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COL12A1Q99715 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.3■□□□□ 0.52
COL12A1Q99715 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.3■□□□□ 0.52
COL12A1Q99715 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.3■□□□□ 0.52
COL12A1Q99715 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
COL12A1Q99715 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL12A1Q99715 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL12A1Q99715 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL12A1Q99715 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.3■□□□□ 0.52
COL12A1Q99715 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.3■□□□□ 0.52
COL12A1Q99715 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL12A1Q99715 AC104076.2-201ENST00000448912 469 ntBASIC18.29■□□□□ 0.52
COL12A1Q99715 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.29■□□□□ 0.52
COL12A1Q99715 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.29■□□□□ 0.52
COL12A1Q99715 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL12A1Q99715 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL12A1Q99715 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.29■□□□□ 0.52
COL12A1Q99715 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.29■□□□□ 0.52
COL12A1Q99715 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL12A1Q99715 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL12A1Q99715 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
COL12A1Q99715 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL12A1Q99715 AF186192.3-201ENST00000583427 947 ntBASIC18.29■□□□□ 0.52
COL12A1Q99715 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
COL12A1Q99715 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL12A1Q99715 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL12A1Q99715 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL12A1Q99715 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL12A1Q99715 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.28■□□□□ 0.52
COL12A1Q99715 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.28■□□□□ 0.52
COL12A1Q99715 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COL12A1Q99715 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL12A1Q99715 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms