Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 INGX-201ENST00000359239 846 ntBASIC6.44□□□□□ -1.38
HMCN1Q96RW7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC6.44□□□□□ -1.38
HMCN1Q96RW7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 TSPY21P-201ENST00000433481 731 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 TSPY23P-201ENST00000440136 739 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC130371.2-201ENST00000619443 611 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC027796.2-201ENST00000575326 344 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC010501.1-201ENST00000606270 1962 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 PMS2P2-201ENST00000425039 1128 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 MIR3197-201ENST00000582241 73 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 AC068587.7-201ENST00000641602 218 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 VENTXP5-201ENST00000523979 775 ntBASIC6.43□□□□□ -1.38
HMCN1Q96RW7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMCN1Q96RW7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 MIR564-202ENST00000385049 94 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 AC004951.3-201ENST00000418645 1148 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 AL353807.1-201ENST00000427475 662 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 AC092119.3-201ENST00000612618 583 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 AP005242.2-201ENST00000580065 1175 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 ECEL1P2-202ENST00000465689 757 ntBASIC6.42□□□□□ -1.38
HMCN1Q96RW7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
HMCN1Q96RW7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms