Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.65■□□□□ 0.42
CITED4Q96RK1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.65■□□□□ 0.42
CITED4Q96RK1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CITED4Q96RK1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CITED4Q96RK1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CITED4Q96RK1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 AC239859.2-201ENST00000444165 318 ntBASIC17.64■□□□□ 0.41
CITED4Q96RK1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 Z92544.1-202ENST00000571933 1220 ntBASIC17.64■□□□□ 0.41
CITED4Q96RK1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CITED4Q96RK1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.64■□□□□ 0.41
CITED4Q96RK1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.63■□□□□ 0.41
CITED4Q96RK1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CITED4Q96RK1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 AC008406.3-201ENST00000620001 1374 ntBASIC17.62■□□□□ 0.41
CITED4Q96RK1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CITED4Q96RK1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CITED4Q96RK1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CITED4Q96RK1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.61■□□□□ 0.41
CITED4Q96RK1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms