Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 AC104564.3-201ENST00000582367 638 ntBASIC15.61■□□□□ 0.09
AP1S3Q96PC3 MTDHP2-201ENST00000601468 714 ntBASIC15.61■□□□□ 0.09
AP1S3Q96PC3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
AP1S3Q96PC3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.6■□□□□ 0.09
AP1S3Q96PC3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S3Q96PC3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 C17orf82-201ENST00000623772 1530 ntBASIC15.59■□□□□ 0.09
AP1S3Q96PC3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 FEM1AP4-201ENST00000443167 1987 ntBASIC15.59■□□□□ 0.09
AP1S3Q96PC3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
AP1S3Q96PC3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP1S3Q96PC3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP1S3Q96PC3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP1S3Q96PC3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
AP1S3Q96PC3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP1S3Q96PC3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 KRT125P-201ENST00000546827 989 ntBASIC15.58■□□□□ 0.08
AP1S3Q96PC3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms