Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 AC105020.6-201ENST00000621523 1217 ntBASIC22.27■■□□□ 1.16
CASD1Q96PB1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CASD1Q96PB1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.26■■□□□ 1.15
CASD1Q96PB1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASD1Q96PB1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 AC242852.2-201ENST00000615738 1807 ntBASIC22.25■■□□□ 1.15
CASD1Q96PB1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 UBE2SP1-201ENST00000450587 669 ntBASIC22.25■■□□□ 1.15
CASD1Q96PB1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASD1Q96PB1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CASD1Q96PB1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.24■■□□□ 1.15
CASD1Q96PB1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASD1Q96PB1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.24■■□□□ 1.15
CASD1Q96PB1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 KRT17P3-201ENST00000420566 1262 ntBASIC22.23■■□□□ 1.15
CASD1Q96PB1 AC008550.1-201ENST00000511500 884 ntBASIC22.23■■□□□ 1.15
CASD1Q96PB1 RPPH1-201ENST00000516869 333 ntBASIC22.23■■□□□ 1.15
CASD1Q96PB1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 SOX15-203ENST00000570788 1093 ntBASIC22.23■■□□□ 1.15
CASD1Q96PB1 AC233263.1-201ENST00000578059 224 ntBASIC22.23■■□□□ 1.15
CASD1Q96PB1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.23■■□□□ 1.15
CASD1Q96PB1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASD1Q96PB1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.22■■□□□ 1.15
CASD1Q96PB1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms