Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.66■□□□□ 0.26
RITA1Q96K30 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RITA1Q96K30 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RITA1Q96K30 PKD1P6-201ENST00000343738 4769 ntBASIC16.66■□□□□ 0.26
RITA1Q96K30 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RITA1Q96K30 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RITA1Q96K30 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RITA1Q96K30 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RITA1Q96K30 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RITA1Q96K30 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.65■□□□□ 0.26
RITA1Q96K30 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.65■□□□□ 0.26
RITA1Q96K30 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.65■□□□□ 0.26
RITA1Q96K30 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.65■□□□□ 0.26
RITA1Q96K30 MIR5787-201ENST00000611784 55 ntBASIC16.65■□□□□ 0.26
RITA1Q96K30 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RITA1Q96K30 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RITA1Q96K30 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.65■□□□□ 0.26
RITA1Q96K30 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RITA1Q96K30 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
RITA1Q96K30 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
RITA1Q96K30 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.64■□□□□ 0.25
RITA1Q96K30 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.64■□□□□ 0.25
RITA1Q96K30 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.64■□□□□ 0.25
RITA1Q96K30 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.64■□□□□ 0.25
RITA1Q96K30 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.64■□□□□ 0.25
RITA1Q96K30 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RITA1Q96K30 AC006128.1-201ENST00000624704 1661 ntBASIC16.64■□□□□ 0.25
RITA1Q96K30 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RITA1Q96K30 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.64■□□□□ 0.25
RITA1Q96K30 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.64■□□□□ 0.25
RITA1Q96K30 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RITA1Q96K30 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.63■□□□□ 0.25
RITA1Q96K30 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.63■□□□□ 0.25
RITA1Q96K30 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.63■□□□□ 0.25
RITA1Q96K30 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.63■□□□□ 0.25
RITA1Q96K30 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.63■□□□□ 0.25
RITA1Q96K30 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.63■□□□□ 0.25
RITA1Q96K30 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RITA1Q96K30 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.63■□□□□ 0.25
RITA1Q96K30 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RITA1Q96K30 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.63■□□□□ 0.25
RITA1Q96K30 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RITA1Q96K30 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.62■□□□□ 0.25
RITA1Q96K30 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RITA1Q96K30 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.62■□□□□ 0.25
RITA1Q96K30 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.62■□□□□ 0.25
RITA1Q96K30 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.62■□□□□ 0.25
RITA1Q96K30 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RITA1Q96K30 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.62■□□□□ 0.25
RITA1Q96K30 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.62■□□□□ 0.25
RITA1Q96K30 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RITA1Q96K30 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.62■□□□□ 0.25
RITA1Q96K30 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RITA1Q96K30 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.62■□□□□ 0.25
RITA1Q96K30 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.62■□□□□ 0.25
RITA1Q96K30 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms