Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SMARCD1Q96GM5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 AC116050.2-201ENST00000612102 1779 ntBASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 MKRN4P-201ENST00000444706 1521 ntBASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCD1Q96GM5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 AL024507.2-201ENST00000606070 2574 ntBASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 AL355802.2-201ENST00000402069 882 ntBASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMARCD1Q96GM5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCD1Q96GM5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 AC010980.2-201ENST00000587099 1412 ntBASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCD1Q96GM5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCD1Q96GM5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCD1Q96GM5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMARCD1Q96GM5 AC142086.2-201ENST00000569753 217 ntBASIC21.83■■□□□ 1.09
SMARCD1Q96GM5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCD1Q96GM5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMARCD1Q96GM5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 AC100791.3-201ENST00000617619 330 ntBASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms