Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
SIPA1Q96FS4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SIPA1Q96FS4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIPA1Q96FS4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIPA1Q96FS4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIPA1Q96FS4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 GCSHP5-201ENST00000443090 522 ntBASIC20.82■□□□□ 0.92
SIPA1Q96FS4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 AC242852.2-201ENST00000615738 1807 ntBASIC20.82■□□□□ 0.92
SIPA1Q96FS4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIPA1Q96FS4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 AC060766.5-201ENST00000590539 871 ntBASIC20.81■□□□□ 0.92
SIPA1Q96FS4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 HLA-B-256ENST00000639848 1089 ntBASIC20.81■□□□□ 0.92
SIPA1Q96FS4 AP006294.2-201ENST00000641667 209 ntBASIC20.81■□□□□ 0.92
SIPA1Q96FS4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIPA1Q96FS4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 AL158047.1-201ENST00000445918 881 ntBASIC20.8■□□□□ 0.92
SIPA1Q96FS4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 AC142381.4-202ENST00000563973 229 ntBASIC20.8■□□□□ 0.92
SIPA1Q96FS4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIPA1Q96FS4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIPA1Q96FS4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 AC116050.2-201ENST00000612102 1779 ntBASIC20.78■□□□□ 0.92
SIPA1Q96FS4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 AC073648.6-201ENST00000641589 218 ntBASIC20.78■□□□□ 0.92
SIPA1Q96FS4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms