Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AC116050.2-201ENST00000612102 1779 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 AC007322.3-201ENST00000426526 701 ntBASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 TSPY6P-201ENST00000448518 926 ntBASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC3Q96DC8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 AC008694.1-202ENST00000636953 945 ntBASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC3Q96DC8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 AC105036.2-201ENST00000569468 176 ntBASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 AL109923.1-201ENST00000618799 583 ntBASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC3Q96DC8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ECHDC3Q96DC8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 AC100791.3-201ENST00000617619 330 ntBASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC3Q96DC8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.91
ECHDC3Q96DC8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ECHDC3Q96DC8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ECHDC3Q96DC8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 AC010980.2-201ENST00000587099 1412 ntBASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ECHDC3Q96DC8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms