Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 RARRES2P6-201ENST00000567333 442 ntBASIC20.2■□□□□ 0.82
ATL1Q8WXF7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 RNF165-205ENST00000588679 2904 ntBASIC20.2■□□□□ 0.82
ATL1Q8WXF7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.2■□□□□ 0.82
ATL1Q8WXF7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 AC121338.2-201ENST00000622535 1744 ntBASIC20.19■□□□□ 0.82
ATL1Q8WXF7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATL1Q8WXF7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 AC026271.2-201ENST00000428091 497 ntBASIC20.18■□□□□ 0.82
ATL1Q8WXF7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.18■□□□□ 0.82
ATL1Q8WXF7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.17■□□□□ 0.82
ATL1Q8WXF7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 RARRES2P11-201ENST00000635158 484 ntBASIC20.17■□□□□ 0.82
ATL1Q8WXF7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.17■□□□□ 0.82
ATL1Q8WXF7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 KRT18P61-201ENST00000585825 1298 ntBASIC20.16■□□□□ 0.82
ATL1Q8WXF7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATL1Q8WXF7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 AC243732.1-201ENST00000612648 864 ntBASIC20.15■□□□□ 0.82
ATL1Q8WXF7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 AC006128.1-201ENST00000624704 1661 ntBASIC20.15■□□□□ 0.82
ATL1Q8WXF7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATL1Q8WXF7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ATL1Q8WXF7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 AC011484.1-201ENST00000377652 1995 ntBASIC20.14■□□□□ 0.81
ATL1Q8WXF7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms