Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01560Q8TB33 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 AL359736.2-201ENST00000621992 437 ntBASIC17.98■□□□□ 0.47
LINC01560Q8TB33 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LINC01560Q8TB33 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 CYP21A1P-202ENST00000354927 1481 ntBASIC17.97■□□□□ 0.47
LINC01560Q8TB33 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 FAM197Y4-202ENST00000622692 608 ntBASIC17.97■□□□□ 0.47
LINC01560Q8TB33 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC01560Q8TB33 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 KRT17P3-201ENST00000420566 1262 ntBASIC17.96■□□□□ 0.47
LINC01560Q8TB33 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 UBE2SP1-201ENST00000450587 669 ntBASIC17.96■□□□□ 0.47
LINC01560Q8TB33 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 C1QBPP2-201ENST00000528754 825 ntBASIC17.96■□□□□ 0.47
LINC01560Q8TB33 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01560Q8TB33 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
LINC01560Q8TB33 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.96■□□□□ 0.46
LINC01560Q8TB33 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LINC01560Q8TB33 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LINC01560Q8TB33 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms