Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 AL023875.1-201ENST00000640777 796 ntBASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.51■■□□□ 1.83
LINC00116Q8NCU8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 AL049637.2-201ENST00000641778 930 ntBASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LINC00116Q8NCU8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
LINC00116Q8NCU8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 AC080038.3-201ENST00000623346 1952 ntBASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 AC133681.1-201ENST00000465482 601 ntBASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 C2orf69P4-201ENST00000565394 541 ntBASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.48■■□□□ 1.83
LINC00116Q8NCU8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LINC00116Q8NCU8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.46■■□□□ 1.83
LINC00116Q8NCU8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms