Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMRP1Q8NCR6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 C2orf69P4-201ENST00000565394 541 ntBASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 AC120498.8-201ENST00000614275 531 ntBASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMRP1Q8NCR6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 RARRES2P10-201ENST00000564312 460 ntBASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMRP1Q8NCR6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 KRASP1-201ENST00000407852 552 ntBASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 PRKY-204ENST00000533551 1019 ntBASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 CD177P1-201ENST00000606252 935 ntBASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMRP1Q8NCR6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 TMPOP1-202ENST00000424642 1267 ntBASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.58■■□□□ 1.05
SMRP1Q8NCR6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMRP1Q8NCR6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.58■■□□□ 1.04
SMRP1Q8NCR6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMRP1Q8NCR6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMRP1Q8NCR6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.58■■□□□ 1.04
SMRP1Q8NCR6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMRP1Q8NCR6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 KRT18P35-201ENST00000510488 1269 ntBASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms