Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 AL162412.1-201ENST00000567129 965 ntBASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC01555Q8NAE3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.02■□□□□ 0.79
LINC01555Q8NAE3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01555Q8NAE3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 AL137060.1-201ENST00000618151 2648 ntBASIC20■□□□□ 0.79
LINC01555Q8NAE3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20■□□□□ 0.79
LINC01555Q8NAE3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LINC01555Q8NAE3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20■□□□□ 0.79
LINC01555Q8NAE3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LINC01555Q8NAE3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20■□□□□ 0.79
LINC01555Q8NAE3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LINC01555Q8NAE3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01555Q8NAE3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 AC116050.2-201ENST00000612102 1779 ntBASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01555Q8NAE3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 NCF1B-203ENST00000435988 1254 ntBASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01555Q8NAE3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 AC007322.3-201ENST00000426526 701 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 CDV3P1-201ENST00000471403 739 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 RARRES2P4-201ENST00000514074 484 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 AC133552.2-202ENST00000575694 574 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 FAM21FP-204ENST00000608637 956 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01555Q8NAE3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 AC093787.1-201ENST00000450396 207 ntBASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms