Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 AC007322.3-201ENST00000426526 701 ntBASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 FAM21FP-204ENST00000608637 956 ntBASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 AL050303.2-201ENST00000619798 666 ntBASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 AC069236.1-201ENST00000604339 616 ntBASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAM1L1Q8N609 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 AC016405.3-201ENST00000607710 860 ntBASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 AC008694.1-202ENST00000636953 945 ntBASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAM1L1Q8N609 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 RARRES2P4-201ENST00000514074 484 ntBASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 AC133552.2-202ENST00000575694 574 ntBASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 OR10C1-204ENST00000622521 1039 ntBASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAM1L1Q8N609 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAM1L1Q8N609 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
TRAM1L1Q8N609 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAM1L1Q8N609 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 AL121832.2-201ENST00000610979 668 ntBASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 AC011484.1-201ENST00000377652 1995 ntBASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAM1L1Q8N609 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms