Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 AC121338.2-201ENST00000622535 1744 ntBASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 AC245052.3-201ENST00000450182 901 ntBASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 SLC7A5P2-201ENST00000553010 536 ntBASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC9CQ8N5M4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 SLC7A5P1-201ENST00000568957 537 ntBASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.34■□□□□ 0.21
TTC9CQ8N5M4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
TTC9CQ8N5M4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 NTF6G-201ENST00000591094 616 ntBASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 RARRES2P11-201ENST00000635158 484 ntBASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 AC019069.1-201ENST00000610008 1333 ntBASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 AC006128.1-201ENST00000624704 1661 ntBASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC9CQ8N5M4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 AC087623.3-201ENST00000607047 1098 ntBASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC9CQ8N5M4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 PLK5-205ENST00000642079 1969 ntBASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms