Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC087633.2-202ENST00000565166 1439 ntBASIC31.11■■■□□ 2.57
ABCA6Q8N139 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
ABCA6Q8N139 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.1■■■□□ 2.57
ABCA6Q8N139 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
ABCA6Q8N139 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
ABCA6Q8N139 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.1■■■□□ 2.57
ABCA6Q8N139 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA6Q8N139 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA6Q8N139 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA6Q8N139 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 KRT17P2-201ENST00000300992 1314 ntBASIC31.09■■■□□ 2.57
ABCA6Q8N139 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 KRASP1-201ENST00000407852 552 ntBASIC31.09■■■□□ 2.57
ABCA6Q8N139 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.09■■■□□ 2.57
ABCA6Q8N139 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
ABCA6Q8N139 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
ABCA6Q8N139 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA6Q8N139 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.08■■■□□ 2.57
ABCA6Q8N139 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA6Q8N139 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
ABCA6Q8N139 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA6Q8N139 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
ABCA6Q8N139 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA6Q8N139 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA6Q8N139 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.08■■■□□ 2.57
ABCA6Q8N139 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA6Q8N139 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
ABCA6Q8N139 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.07■■■□□ 2.56
ABCA6Q8N139 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA6Q8N139 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA6Q8N139 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA6Q8N139 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA6Q8N139 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
ABCA6Q8N139 AC026471.6-201ENST00000622954 1905 ntBASIC31.07■■■□□ 2.56
ABCA6Q8N139 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA6Q8N139 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ABCA6Q8N139 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ABCA6Q8N139 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ABCA6Q8N139 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ABCA6Q8N139 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ABCA6Q8N139 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.06■■■□□ 2.56
ABCA6Q8N139 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.05■■■□□ 2.56
ABCA6Q8N139 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.05■■■□□ 2.56
ABCA6Q8N139 AC068473.5-201ENST00000616428 2072 ntBASIC31.05■■■□□ 2.56
ABCA6Q8N139 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA6Q8N139 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA6Q8N139 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA6Q8N139 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA6Q8N139 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
ABCA6Q8N139 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.05■■■□□ 2.56
ABCA6Q8N139 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA6Q8N139 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 RARRES2P10-201ENST00000564312 460 ntBASIC31.04■■■□□ 2.56
ABCA6Q8N139 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 AL353708.3-201ENST00000610272 989 ntBASIC31.04■■■□□ 2.56
ABCA6Q8N139 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.04■■■□□ 2.56
ABCA6Q8N139 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA6Q8N139 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
ABCA6Q8N139 KRT18P35-201ENST00000510488 1269 ntBASIC31.03■■■□□ 2.56
ABCA6Q8N139 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.03■■■□□ 2.56
ABCA6Q8N139 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
ABCA6Q8N139 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.03■■■□□ 2.56
ABCA6Q8N139 AC093323.1-202ENST00000635031 2045 ntBASIC31.03■■■□□ 2.56
ABCA6Q8N139 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 AL135905.2-201ENST00000584934 1404 ntBASIC31.02■■■□□ 2.56
ABCA6Q8N139 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA6Q8N139 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms