Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 DUX4L5-201ENST00000630834 1275 ntBASIC25.64■■□□□ 1.7
CHD1LQ86WJ1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHD1LQ86WJ1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
CHD1LQ86WJ1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.64■■□□□ 1.69
CHD1LQ86WJ1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHD1LQ86WJ1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 AC027702.1-201ENST00000563810 1770 ntBASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.63■■□□□ 1.69
CHD1LQ86WJ1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 AC004854.2-201ENST00000608450 1441 ntBASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.62■■□□□ 1.69
CHD1LQ86WJ1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 SLC25A24-204ENST00000569674 2357 ntBASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1LQ86WJ1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 FP700111.2-201ENST00000619190 1892 ntBASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
CHD1LQ86WJ1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1LQ86WJ1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 KRT18P61-201ENST00000585825 1298 ntBASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 AC120498.10-201ENST00000621827 505 ntBASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.58■■□□□ 1.69
CHD1LQ86WJ1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms