Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 AC055733.4-201ENST00000638462 1354 ntBASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 AC099778.1-201ENST00000568593 1911 ntBASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
LRRTM1Q86UE6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 MIR4466-201ENST00000606121 54 ntBASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM1Q86UE6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 AL035685.1-201ENST00000636663 812 ntBASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM1Q86UE6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LRRTM1Q86UE6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 AC009237.3-201ENST00000393279 1427 ntBASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM1Q86UE6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM1Q86UE6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms