Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 AC008175.2-201ENST00000612840 297 ntBASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 RARRES2P11-201ENST00000635158 484 ntBASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 AC080038.1-201ENST00000611274 1154 ntBASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP1BQ7LBR1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP1BQ7LBR1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 AC010141.2-201ENST00000452426 721 ntBASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP1BQ7LBR1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 AC090192.1-201ENST00000517740 490 ntBASIC19■□□□□ 0.63
CHMP1BQ7LBR1 KRT18P20-201ENST00000548986 1279 ntBASIC19■□□□□ 0.63
CHMP1BQ7LBR1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 EEF1DP3-203ENST00000566025 782 ntBASIC19■□□□□ 0.63
CHMP1BQ7LBR1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP1BQ7LBR1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP1BQ7LBR1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP1BQ7LBR1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP1BQ7LBR1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP1BQ7LBR1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP1BQ7LBR1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms