Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 AC121338.2-201ENST00000622535 1744 ntBASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCD3Q6STE5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 AC106739.1-201ENST00000617035 715 ntBASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD3Q6STE5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 EDA-201ENST00000338901 1233 ntBASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 AP001330.3-201ENST00000520123 633 ntBASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCD3Q6STE5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 MIR572-201ENST00000384983 95 ntBASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 GABARAPL3-202ENST00000624044 1851 ntBASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD3Q6STE5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 AP005212.1-201ENST00000581547 1997 ntBASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD3Q6STE5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 AL355001.2-201ENST00000620617 1191 ntBASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD3Q6STE5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 RASA4CP-201ENST00000424092 1398 ntBASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD3Q6STE5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms