Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
REEP3Q6NUK4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
REEP3Q6NUK4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
REEP3Q6NUK4 AC061975.6-201ENST00000579045 1553 ntBASIC19.32■□□□□ 0.68
REEP3Q6NUK4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 SUDS3P1-201ENST00000505831 966 ntBASIC19.31■□□□□ 0.68
REEP3Q6NUK4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
REEP3Q6NUK4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 AC011484.1-201ENST00000377652 1995 ntBASIC19.3■□□□□ 0.68
REEP3Q6NUK4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.3■□□□□ 0.68
REEP3Q6NUK4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 AL358852.1-201ENST00000623174 1268 ntBASIC19.3■□□□□ 0.68
REEP3Q6NUK4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
REEP3Q6NUK4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 AC027702.1-201ENST00000563810 1770 ntBASIC19.29■□□□□ 0.68
REEP3Q6NUK4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
REEP3Q6NUK4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 AC020907.5-201ENST00000624372 1936 ntBASIC19.28■□□□□ 0.68
REEP3Q6NUK4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
REEP3Q6NUK4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 FP700111.2-201ENST00000619190 1892 ntBASIC19.27■□□□□ 0.68
REEP3Q6NUK4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.27■□□□□ 0.68
REEP3Q6NUK4 AC008175.2-201ENST00000612840 297 ntBASIC19.27■□□□□ 0.68
REEP3Q6NUK4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
REEP3Q6NUK4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.27■□□□□ 0.67
REEP3Q6NUK4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
REEP3Q6NUK4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
REEP3Q6NUK4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms