Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 LINC01023-201ENST00000606054 436 ntBASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 AC010542.4-201ENST00000563151 1910 ntBASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 MIR1224-201ENST00000408193 85 ntBASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 AC012618.2-201ENST00000428058 849 ntBASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 AC068473.5-201ENST00000616428 2072 ntBASIC20.46■□□□□ 0.87
LYSMD4Q5XG99 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD4Q5XG99 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 AC233702.5-201ENST00000584107 538 ntBASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD4Q5XG99 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 C2orf69P4-201ENST00000565394 541 ntBASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD4Q5XG99 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 RPS2P55-201ENST00000397318 883 ntBASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 AC107956.1-201ENST00000494359 873 ntBASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 BX088651.1-201ENST00000540551 451 ntBASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 KRT17P2-201ENST00000300992 1314 ntBASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms