Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CCDC30Q5VVM6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC30Q5VVM6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC30Q5VVM6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 MIPEPP3-201ENST00000412105 444 ntBASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC30Q5VVM6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 AL024507.2-201ENST00000606070 2574 ntBASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 AC100791.3-201ENST00000617619 330 ntBASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC30Q5VVM6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC30Q5VVM6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.48■■□□□ 1.83
CCDC30Q5VVM6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 BX276092.2-201ENST00000417668 665 ntBASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 AC073210.2-201ENST00000430369 194 ntBASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC30Q5VVM6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 MIR4758-201ENST00000577688 71 ntBASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.46■■□□□ 1.83
CCDC30Q5VVM6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCDC30Q5VVM6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCDC30Q5VVM6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms