Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 AC024257.2-201ENST00000549699 147 ntBASIC19.89■□□□□ 0.77
PDCD4Q53EL6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 AC105233.4-201ENST00000642045 216 ntBASIC19.89■□□□□ 0.77
PDCD4Q53EL6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 AL136162.1-201ENST00000607711 1078 ntBASIC19.88■□□□□ 0.77
PDCD4Q53EL6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
PDCD4Q53EL6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDCD4Q53EL6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCD4Q53EL6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.85■□□□□ 0.77
PDCD4Q53EL6 AC135279.3-201ENST00000610945 1311 ntBASIC19.85■□□□□ 0.77
PDCD4Q53EL6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCD4Q53EL6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms