Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6AP1LQ52LC2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6AP1LQ52LC2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 AL355001.2-201ENST00000620617 1191 ntBASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6AP1LQ52LC2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 AC007225.1-201ENST00000566331 1836 ntBASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6AP1LQ52LC2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 AC053503.5-201ENST00000601508 636 ntBASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6AP1LQ52LC2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 MIR939-201ENST00000401314 82 ntBASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 AC091305.1-201ENST00000479476 895 ntBASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 AF213884.3-201ENST00000563833 479 ntBASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ATP6AP1LQ52LC2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP6AP1LQ52LC2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms