Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.47■■□□□ 1.03
IRX4P78413 AC069152.1-201ENST00000438030 544 ntBASIC21.47■■□□□ 1.03
IRX4P78413 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
IRX4P78413 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 AF106564.1-201ENST00000607058 2553 ntBASIC21.47■■□□□ 1.03
IRX4P78413 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
IRX4P78413 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IRX4P78413 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.46■■□□□ 1.03
IRX4P78413 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.46■■□□□ 1.03
IRX4P78413 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IRX4P78413 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
IRX4P78413 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
IRX4P78413 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
IRX4P78413 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
IRX4P78413 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.45■■□□□ 1.02
IRX4P78413 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
IRX4P78413 UBE2DNL-204ENST00000602536 740 ntBASIC21.45■■□□□ 1.02
IRX4P78413 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.45■■□□□ 1.02
IRX4P78413 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.45■■□□□ 1.02
IRX4P78413 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
IRX4P78413 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
IRX4P78413 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.44■■□□□ 1.02
IRX4P78413 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.44■■□□□ 1.02
IRX4P78413 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
IRX4P78413 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.44■■□□□ 1.02
IRX4P78413 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.44■■□□□ 1.02
IRX4P78413 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.44■■□□□ 1.02
IRX4P78413 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 KRT87P-202ENST00000534226 1464 ntBASIC21.44■■□□□ 1.02
IRX4P78413 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.44■■□□□ 1.02
IRX4P78413 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IRX4P78413 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.44■■□□□ 1.02
IRX4P78413 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 AC093827.2-201ENST00000512654 315 ntBASIC21.43■■□□□ 1.02
IRX4P78413 AC133041.1-202ENST00000642053 222 ntBASIC21.43■■□□□ 1.02
IRX4P78413 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
IRX4P78413 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.43■■□□□ 1.02
IRX4P78413 AC005224.4-201ENST00000583262 1652 ntBASIC21.43■■□□□ 1.02
IRX4P78413 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IRX4P78413 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
IRX4P78413 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
IRX4P78413 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.42■■□□□ 1.02
IRX4P78413 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
IRX4P78413 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.42■■□□□ 1.02
IRX4P78413 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
IRX4P78413 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.42■■□□□ 1.02
IRX4P78413 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.42■■□□□ 1.02
IRX4P78413 Z98882.1-201ENST00000622160 2253 ntBASIC21.42■■□□□ 1.02
IRX4P78413 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.42■■□□□ 1.02
IRX4P78413 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.42■■□□□ 1.02
IRX4P78413 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IRX4P78413 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.41■■□□□ 1.02
IRX4P78413 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.41■■□□□ 1.02
IRX4P78413 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.41■■□□□ 1.02
IRX4P78413 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.41■■□□□ 1.02
IRX4P78413 AC008687.6-201ENST00000596318 630 ntBASIC21.41■■□□□ 1.02
IRX4P78413 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms