Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 AC007225.1-201ENST00000566331 1836 ntBASIC18.67■□□□□ 0.58
LSM3P62310 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM3P62310 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.67■□□□□ 0.58
LSM3P62310 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM3P62310 AL162377.1-201ENST00000618844 1793 ntBASIC18.67■□□□□ 0.58
LSM3P62310 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM3P62310 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM3P62310 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM3P62310 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LSM3P62310 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSM3P62310 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM3P62310 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM3P62310 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LSM3P62310 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM3P62310 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.66■□□□□ 0.58
LSM3P62310 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LSM3P62310 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM3P62310 RNF126P1-201ENST00000567452 1320 ntBASIC18.66■□□□□ 0.58
LSM3P62310 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LSM3P62310 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM3P62310 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LSM3P62310 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LSM3P62310 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSM3P62310 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM3P62310 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM3P62310 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LSM3P62310 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM3P62310 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM3P62310 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM3P62310 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM3P62310 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.64■□□□□ 0.58
LSM3P62310 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.64■□□□□ 0.58
LSM3P62310 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM3P62310 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM3P62310 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LSM3P62310 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.64■□□□□ 0.58
LSM3P62310 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM3P62310 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM3P62310 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM3P62310 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LSM3P62310 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM3P62310 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 AC121338.2-201ENST00000622535 1744 ntBASIC18.63■□□□□ 0.57
LSM3P62310 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 AC003102.1-202ENST00000563394 1796 ntBASIC18.63■□□□□ 0.57
LSM3P62310 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM3P62310 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms