Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS1BP61024 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.41□□□□□ -0.1
CKS1BP61024 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CKS1BP61024 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CKS1BP61024 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 AC009102.2-201ENST00000606772 1639 ntBASIC14.41□□□□□ -0.1
CKS1BP61024 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CKS1BP61024 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.41□□□□□ -0.1
CKS1BP61024 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CKS1BP61024 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS1BP61024 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.41□□□□□ -0.1
CKS1BP61024 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.4□□□□□ -0.1
CKS1BP61024 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CKS1BP61024 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.4□□□□□ -0.1
CKS1BP61024 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.4□□□□□ -0.1
CKS1BP61024 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.4□□□□□ -0.1
CKS1BP61024 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.4□□□□□ -0.1
CKS1BP61024 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.4□□□□□ -0.1
CKS1BP61024 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.4□□□□□ -0.1
CKS1BP61024 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CKS1BP61024 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CKS1BP61024 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.4□□□□□ -0.1
CKS1BP61024 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CKS1BP61024 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKS1BP61024 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CKS1BP61024 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.39□□□□□ -0.11
CKS1BP61024 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CKS1BP61024 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.39□□□□□ -0.11
CKS1BP61024 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 AC092028.1-203ENST00000608262 953 ntBASIC14.39□□□□□ -0.11
CKS1BP61024 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKS1BP61024 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CKS1BP61024 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CKS1BP61024 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms