Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 AP005212.1-201ENST00000581547 1997 ntBASIC16.8■□□□□ 0.28
SPCS3P61009 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SPCS3P61009 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS3P61009 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
SPCS3P61009 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SPCS3P61009 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPCS3P61009 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.78■□□□□ 0.28
SPCS3P61009 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.78■□□□□ 0.28
SPCS3P61009 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 MIR4466-201ENST00000606121 54 ntBASIC16.78■□□□□ 0.28
SPCS3P61009 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 AC121338.2-201ENST00000622535 1744 ntBASIC16.78■□□□□ 0.28
SPCS3P61009 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SPCS3P61009 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS3P61009 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 AC138932.1-201ENST00000534164 6830 ntBASIC16.77■□□□□ 0.28
SPCS3P61009 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SPCS3P61009 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SPCS3P61009 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SPCS3P61009 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SPCS3P61009 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
SPCS3P61009 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.77■□□□□ 0.28
SPCS3P61009 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.77■□□□□ 0.28
SPCS3P61009 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.77■□□□□ 0.28
SPCS3P61009 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS3P61009 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS3P61009 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS3P61009 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SPCS3P61009 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS3P61009 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS3P61009 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS3P61009 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.77■□□□□ 0.27
SPCS3P61009 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
SPCS3P61009 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SPCS3P61009 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.76■□□□□ 0.27
SPCS3P61009 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.76■□□□□ 0.27
SPCS3P61009 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
SPCS3P61009 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SPCS3P61009 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 AC009237.3-201ENST00000393279 1427 ntBASIC16.76■□□□□ 0.27
SPCS3P61009 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SPCS3P61009 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.76■□□□□ 0.27
SPCS3P61009 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS3P61009 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SPCS3P61009 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.76■□□□□ 0.27
SPCS3P61009 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms