Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.96■□□□□ 0.95
WNT3AP56704 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.96■□□□□ 0.95
WNT3AP56704 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 AC137761.2-201ENST00000561729 223 ntBASIC20.96■□□□□ 0.95
WNT3AP56704 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.96■□□□□ 0.95
WNT3AP56704 AC145350.3-201ENST00000569033 163 ntBASIC20.96■□□□□ 0.95
WNT3AP56704 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.96■□□□□ 0.95
WNT3AP56704 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.96■□□□□ 0.95
WNT3AP56704 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.96■□□□□ 0.95
WNT3AP56704 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
WNT3AP56704 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
WNT3AP56704 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
WNT3AP56704 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.96■□□□□ 0.95
WNT3AP56704 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.96■□□□□ 0.95
WNT3AP56704 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
WNT3AP56704 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
WNT3AP56704 RBM17P2-201ENST00000616397 1405 ntBASIC20.95■□□□□ 0.95
WNT3AP56704 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
WNT3AP56704 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.95■□□□□ 0.94
WNT3AP56704 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 AC006128.1-201ENST00000624704 1661 ntBASIC20.95■□□□□ 0.94
WNT3AP56704 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3AP56704 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.94■□□□□ 0.94
WNT3AP56704 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
WNT3AP56704 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.94■□□□□ 0.94
WNT3AP56704 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.94■□□□□ 0.94
WNT3AP56704 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
WNT3AP56704 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.94■□□□□ 0.94
WNT3AP56704 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.94■□□□□ 0.94
WNT3AP56704 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.94■□□□□ 0.94
WNT3AP56704 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.94■□□□□ 0.94
WNT3AP56704 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
WNT3AP56704 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.94■□□□□ 0.94
WNT3AP56704 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
WNT3AP56704 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3AP56704 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
WNT3AP56704 AC243732.1-201ENST00000612648 864 ntBASIC20.93■□□□□ 0.94
WNT3AP56704 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3AP56704 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.93■□□□□ 0.94
WNT3AP56704 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.92■□□□□ 0.94
WNT3AP56704 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
WNT3AP56704 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
WNT3AP56704 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.92■□□□□ 0.94
WNT3AP56704 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.92■□□□□ 0.94
WNT3AP56704 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3AP56704 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
WNT3AP56704 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
WNT3AP56704 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.91■□□□□ 0.94
WNT3AP56704 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
WNT3AP56704 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
WNT3AP56704 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
WNT3AP56704 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.91■□□□□ 0.94
WNT3AP56704 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.91■□□□□ 0.94
WNT3AP56704 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3AP56704 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
WNT3AP56704 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
WNT3AP56704 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
WNT3AP56704 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
WNT3AP56704 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 AC016769.1-201ENST00000409132 1010 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms