Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH6P55285 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.55■■□□□ 1.04
CDH6P55285 AC087623.3-201ENST00000607047 1098 ntBASIC21.55■■□□□ 1.04
CDH6P55285 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.55■■□□□ 1.04
CDH6P55285 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.55■■□□□ 1.04
CDH6P55285 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH6P55285 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDH6P55285 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH6P55285 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDH6P55285 AC026271.2-201ENST00000428091 497 ntBASIC21.54■■□□□ 1.04
CDH6P55285 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH6P55285 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDH6P55285 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH6P55285 KRT18P61-201ENST00000585825 1298 ntBASIC21.54■■□□□ 1.04
CDH6P55285 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH6P55285 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH6P55285 AL157384.1-201ENST00000445995 2473 ntBASIC21.53■■□□□ 1.04
CDH6P55285 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH6P55285 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH6P55285 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CDH6P55285 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.53■■□□□ 1.04
CDH6P55285 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 RARRES2P11-201ENST00000635158 484 ntBASIC21.53■■□□□ 1.04
CDH6P55285 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CDH6P55285 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH6P55285 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH6P55285 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH6P55285 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH6P55285 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH6P55285 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CDH6P55285 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDH6P55285 AC245052.3-201ENST00000450182 901 ntBASIC21.52■■□□□ 1.04
CDH6P55285 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH6P55285 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH6P55285 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDH6P55285 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH6P55285 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDH6P55285 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDH6P55285 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH6P55285 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDH6P55285 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDH6P55285 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.51■■□□□ 1.03
CDH6P55285 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
CDH6P55285 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH6P55285 KRT19P1-201ENST00000405746 1186 ntBASIC21.51■■□□□ 1.03
CDH6P55285 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDH6P55285 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 KRT18P20-201ENST00000548986 1279 ntBASIC21.51■■□□□ 1.03
CDH6P55285 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH6P55285 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDH6P55285 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH6P55285 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH6P55285 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH6P55285 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDH6P55285 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH6P55285 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH6P55285 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH6P55285 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH6P55285 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH6P55285 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CDH6P55285 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms