Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.49■□□□□ 0.87
CDKN2DP55273 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKN2DP55273 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CDKN2DP55273 AC007225.1-201ENST00000566331 1836 ntBASIC20.49■□□□□ 0.87
CDKN2DP55273 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 KRT18P61-201ENST00000585825 1298 ntBASIC20.49■□□□□ 0.87
CDKN2DP55273 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CDKN2DP55273 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDKN2DP55273 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN2DP55273 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDKN2DP55273 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 AP005212.1-201ENST00000581547 1997 ntBASIC20.48■□□□□ 0.87
CDKN2DP55273 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKN2DP55273 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKN2DP55273 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CDKN2DP55273 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDKN2DP55273 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKN2DP55273 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN2DP55273 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CDKN2DP55273 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKN2DP55273 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDKN2DP55273 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKN2DP55273 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDKN2DP55273 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.47■□□□□ 0.87
CDKN2DP55273 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKN2DP55273 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKN2DP55273 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKN2DP55273 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN2DP55273 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CDKN2DP55273 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDKN2DP55273 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.46■□□□□ 0.87
CDKN2DP55273 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDKN2DP55273 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKN2DP55273 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKN2DP55273 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKN2DP55273 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKN2DP55273 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKN2DP55273 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN2DP55273 AC027702.1-201ENST00000563810 1770 ntBASIC20.46■□□□□ 0.87
CDKN2DP55273 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDKN2DP55273 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKN2DP55273 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CDKN2DP55273 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKN2DP55273 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKN2DP55273 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKN2DP55273 AC120498.10-201ENST00000621827 505 ntBASIC20.45■□□□□ 0.86
CDKN2DP55273 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDKN2DP55273 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKN2DP55273 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKN2DP55273 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN2DP55273 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms