Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLCNKAP51800 AC008694.1-202ENST00000636953 945 ntBASIC20.37■□□□□ 0.85
CLCNKAP51800 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCNKAP51800 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
CLCNKAP51800 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCNKAP51800 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 RARRES2P4-201ENST00000514074 484 ntBASIC20.36■□□□□ 0.85
CLCNKAP51800 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCNKAP51800 FAM21FP-204ENST00000608637 956 ntBASIC20.36■□□□□ 0.85
CLCNKAP51800 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCNKAP51800 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCNKAP51800 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLCNKAP51800 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.35■□□□□ 0.85
CLCNKAP51800 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCNKAP51800 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLCNKAP51800 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCNKAP51800 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.35■□□□□ 0.85
CLCNKAP51800 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CLCNKAP51800 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCNKAP51800 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLCNKAP51800 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCNKAP51800 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCNKAP51800 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLCNKAP51800 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCNKAP51800 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCNKAP51800 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CLCNKAP51800 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLCNKAP51800 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 SLC29A4P1-201ENST00000398760 971 ntBASIC20.34■□□□□ 0.85
CLCNKAP51800 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLCNKAP51800 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCNKAP51800 CDV3P1-201ENST00000471403 739 ntBASIC20.34■□□□□ 0.85
CLCNKAP51800 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCNKAP51800 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.34■□□□□ 0.85
CLCNKAP51800 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.34■□□□□ 0.85
CLCNKAP51800 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCNKAP51800 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCNKAP51800 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCNKAP51800 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCNKAP51800 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCNKAP51800 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCNKAP51800 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLCNKAP51800 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCNKAP51800 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLCNKAP51800 AC016405.3-201ENST00000607710 860 ntBASIC20.33■□□□□ 0.85
CLCNKAP51800 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CLCNKAP51800 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCNKAP51800 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCNKAP51800 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCNKAP51800 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.33■□□□□ 0.84
CLCNKAP51800 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CLCNKAP51800 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCNKAP51800 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCNKAP51800 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCNKAP51800 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CLCNKAP51800 AC073210.2-201ENST00000430369 194 ntBASIC20.32■□□□□ 0.84
CLCNKAP51800 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCNKAP51800 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCNKAP51800 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCNKAP51800 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCNKAP51800 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLCNKAP51800 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCNKAP51800 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCNKAP51800 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLCNKAP51800 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLCNKAP51800 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLCNKAP51800 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCNKAP51800 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCNKAP51800 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLCNKAP51800 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCNKAP51800 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCNKAP51800 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCNKAP51800 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.31■□□□□ 0.84
CLCNKAP51800 AC100791.3-201ENST00000617619 330 ntBASIC20.31■□□□□ 0.84
CLCNKAP51800 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms