Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCN2P51788 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CLCN2P51788 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCN2P51788 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 AL034346.1-201ENST00000568244 1277 ntBASIC20.01■□□□□ 0.79
CLCN2P51788 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN2P51788 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN2P51788 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN2P51788 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CLCN2P51788 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CLCN2P51788 AP004607.7-201ENST00000527152 1677 ntBASIC20■□□□□ 0.79
CLCN2P51788 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20■□□□□ 0.79
CLCN2P51788 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN2P51788 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20■□□□□ 0.79
CLCN2P51788 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20■□□□□ 0.79
CLCN2P51788 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLCN2P51788 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLCN2P51788 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN2P51788 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLCN2P51788 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN2P51788 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLCN2P51788 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN2P51788 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CLCN2P51788 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLCN2P51788 KRT18P5-201ENST00000436075 1291 ntBASIC19.99■□□□□ 0.79
CLCN2P51788 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.99■□□□□ 0.79
CLCN2P51788 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCN2P51788 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN2P51788 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN2P51788 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.99■□□□□ 0.79
CLCN2P51788 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN2P51788 AC005224.4-201ENST00000583262 1652 ntBASIC19.99■□□□□ 0.79
CLCN2P51788 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLCN2P51788 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN2P51788 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLCN2P51788 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLCN2P51788 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN2P51788 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
CLCN2P51788 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 AL020996.1-203ENST00000536896 2307 ntBASIC19.98■□□□□ 0.79
CLCN2P51788 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 AC026471.6-201ENST00000622954 1905 ntBASIC19.98■□□□□ 0.79
CLCN2P51788 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLCN2P51788 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.98■□□□□ 0.79
CLCN2P51788 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLCN2P51788 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN2P51788 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLCN2P51788 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CLCN2P51788 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN2P51788 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLCN2P51788 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
CLCN2P51788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 NTF6G-201ENST00000591094 616 ntBASIC19.97■□□□□ 0.79
CLCN2P51788 AC092666.2-201ENST00000613287 246 ntBASIC19.97■□□□□ 0.79
CLCN2P51788 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN2P51788 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN2P51788 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN2P51788 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN2P51788 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN2P51788 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN2P51788 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms