Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 AHNAK-204ENST00000528508 568 ntAPPRIS ALT2 TSL 414.5□□□□□ -0.091e-7■■■□□ 17.2
AARSP49588 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-7■■■□□ 17.2
AARSP49588 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.04□□□□□ -0.161e-7■■■□□ 17.2
AARSP49588 TMEM168-203ENST00000441474 570 ntTSL 413.83□□□□□ -0.21e-7■■■□□ 17.2
AARSP49588 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.211e-7■■■□□ 17.2
AARSP49588 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.351e-7■■■□□ 17.2
AARSP49588 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.421e-7■■■□□ 17.2
AARSP49588 ADAM17-201ENST00000310823 4349 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-7■■■□□ 17.2
AARSP49588 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.741e-7■■■□□ 17.2
AARSP49588 MAD2L1BP-203ENST00000508232 556 ntTSL 210.37□□□□□ -0.751e-7■■■□□ 17.2
AARSP49588 TMEM168-205ENST00000449743 775 ntTSL 310.11□□□□□ -0.791e-7■■■□□ 17.2
AARSP49588 ZHX1-204ENST00000517516 780 ntTSL 33.32□□□□□ -1.881e-7■■■□□ 17.2
AARSP49588 DIAPH1-213ENST00000523100 1180 ntTSL 525.88■■□□□ 1.737e-7■■■□□ 17
AARSP49588 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.753e-7■■■□□ 17
AARSP49588 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.133e-7■■■□□ 17
AARSP49588 RBM25-207ENST00000528081 3008 ntTSL 26.33□□□□□ -1.43e-7■■■□□ 17
AARSP49588 RBM25-212ENST00000532683 6848 ntTSL 1 (best)6.1□□□□□ -1.433e-7■■■□□ 17
AARSP49588 DDX5-228ENST00000584279 676 ntTSL 322.17■■□□□ 1.142e-6■■■□□ 17
AARSP49588 DDX5-205ENST00000577922 996 ntTSL 522.17■■□□□ 1.142e-6■■■□□ 17
AARSP49588 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.462e-6■■■□□ 17
AARSP49588 DDX5-220ENST00000581806 576 ntTSL 417.47■□□□□ 0.392e-6■■■□□ 17
AARSP49588 DDX5-232ENST00000585111 1051 ntTSL 216.31■□□□□ 0.22e-6■■■□□ 17
AARSP49588 DDX5-219ENST00000581697 580 ntTSL 516.07■□□□□ 0.162e-6■■■□□ 17
AARSP49588 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.65■□□□□ 0.12e-6■■■□□ 17
AARSP49588 DDX5-207ENST00000578400 575 ntTSL 514.87□□□□□ -0.032e-6■■■□□ 17
AARSP49588 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.76□□□□□ -0.052e-6■■■□□ 17
AARSP49588 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC12.53□□□□□ -0.42e-6■■■□□ 17
AARSP49588 DDX5-218ENST00000581693 2156 ntTSL 512.38□□□□□ -0.432e-6■■■□□ 17
AARSP49588 DDX5-203ENST00000540698 2225 ntTSL 512.31□□□□□ -0.442e-6■■■□□ 17
AARSP49588 DDX5-233ENST00000585223 699 ntTSL 212.05□□□□□ -0.482e-6■■■□□ 17
AARSP49588 DDX5-231ENST00000585060 572 ntTSL 410□□□□□ -0.812e-6■■■□□ 17
AARSP49588 DDX5-215ENST00000581230 3558 ntTSL 29.37□□□□□ -0.912e-6■■■□□ 17
AARSP49588 ARID3A-205ENST00000587532 1016 ntTSL 519.94■□□□□ 0.782e-6■■■□□ 16.9
AARSP49588 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.592e-6■■■□□ 16.9
AARSP49588 ARID3A-202ENST00000457152 549 ntTSL 514.32□□□□□ -0.122e-6■■■□□ 16.9
AARSP49588 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.64■□□□□ 0.091e-6■■■□□ 16.9
AARSP49588 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.71□□□□□ -0.061e-6■■■□□ 16.9
AARSP49588 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.141e-6■■■□□ 16.9
AARSP49588 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.431e-6■■■□□ 16.9
AARSP49588 CLK2-204ENST00000471047 701 ntTSL 310.49□□□□□ -0.731e-6■■■□□ 16.9
AARSP49588 CHD4-205ENST00000536301 107 ntTSL 35.69□□□□□ -1.51e-9■■■□□ 16.9
AARSP49588 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.917e-7■■■□□ 16.8
AARSP49588 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.82■□□□□ 0.62e-6■■■□□ 16.8
AARSP49588 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.72■□□□□ 0.592e-6■■■□□ 16.8
AARSP49588 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.517e-7■■■□□ 16.8
AARSP49588 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■■□□ 16.8
AARSP49588 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.5■□□□□ 0.392e-6■■■□□ 16.8
AARSP49588 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.33■□□□□ 0.362e-6■■■□□ 16.8
AARSP49588 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.35■□□□□ 0.212e-6■■■□□ 16.8
AARSP49588 IGFL2-AS1-201ENST00000594027 294 ntTSL 311.82□□□□□ -0.524e-8■■■□□ 16.8
AARSP49588 IGFL2-AS1-205ENST00000599817 340 ntTSL 211.68□□□□□ -0.544e-8■■■□□ 16.8
AARSP49588 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC11.24□□□□□ -0.614e-8■■■□□ 16.8
AARSP49588 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.682e-17■■■□□ 16.8
AARSP49588 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.674e-6■■■□□ 16.8
AARSP49588 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.83■■□□□ 1.414e-6■■■□□ 16.8
AARSP49588 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.63□□□□□ -1.354e-6■■■□□ 16.8
AARSP49588 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.374e-6■■■□□ 16.8
AARSP49588 AGRN-205ENST00000469403 899 ntTSL 328.51■■■□□ 2.152e-6■■■□□ 16.7
AARSP49588 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.64□□□□□ -0.074e-6■■■□□ 16.7
AARSP49588 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.793e-8■■■□□ 16.7
AARSP49588 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.723e-8■■■□□ 16.7
AARSP49588 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.56□□□□□ -1.362e-6■■■□□ 16.7
AARSP49588 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.48■■□□□ 1.035e-8■■■□□ 16.6
AARSP49588 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.81■□□□□ 0.925e-8■■■□□ 16.6
AARSP49588 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.9■□□□□ 0.785e-8■■■□□ 16.6
AARSP49588 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.43□□□□□ -0.15e-8■■■□□ 16.6
AARSP49588 RTN4-211ENST00000438462 656 ntTSL 511.96□□□□□ -0.495e-8■■■□□ 16.6
AARSP49588 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.52□□□□□ -0.895e-8■■■□□ 16.6
AARSP49588 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.42□□□□□ -1.225e-8■■■□□ 16.6
AARSP49588 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.34□□□□□ -1.725e-8■■■□□ 16.6
AARSP49588 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.92□□□□□ -1.785e-8■■■□□ 16.6
AARSP49588 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.45■□□□□ 0.868e-7■■■□□ 16.6
AARSP49588 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.07■□□□□ 0.88e-7■■■□□ 16.6
AARSP49588 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.688e-7■■■□□ 16.6
AARSP49588 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.69□□□□□ -1.662e-7■■■□□ 16.6
AARSP49588 GAS5-204ENST00000421068 1060 ntTSL 24.36□□□□□ -1.712e-7■■■□□ 16.6
AARSP49588 GAS5-229ENST00000458220 469 ntTSL 23.94□□□□□ -1.782e-7■■■□□ 16.6
AARSP49588 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.063e-6■■■□□ 16.6
AARSP49588 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.043e-6■■■□□ 16.6
AARSP49588 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.043e-6■■■□□ 16.6
AARSP49588 TCF25-224ENST00000570116 1947 ntTSL 518.23■□□□□ 0.512e-11■■■□□ 16.5
AARSP49588 TCF25-206ENST00000562193 627 ntTSL 312.13□□□□□ -0.472e-11■■■□□ 16.5
AARSP49588 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.46■■□□□ 1.993e-6■■■□□ 16.5
AARSP49588 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.873e-6■■■□□ 16.5
AARSP49588 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.853e-6■■■□□ 16.5
AARSP49588 AC110285.6-201ENST00000617652 491 ntBASIC24.45■■□□□ 1.53e-6■■■□□ 16.5
AARSP49588 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.493e-6■■■□□ 16.5
AARSP49588 R3HDM4-205ENST00000589445 705 ntTSL 324.13■■□□□ 1.453e-6■■■□□ 16.5
AARSP49588 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.423e-6■■■□□ 16.5
AARSP49588 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.383e-6■■■□□ 16.5
AARSP49588 KMT2D-203ENST00000547610 636 ntTSL 523.27■■□□□ 1.323e-6■■■□□ 16.5
AARSP49588 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.11■■□□□ 1.293e-6■■■□□ 16.5
AARSP49588 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.17■■□□□ 1.143e-6■■■□□ 16.5
AARSP49588 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.143e-6■■■□□ 16.5
AARSP49588 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.073e-6■■■□□ 16.5
AARSP49588 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.98■□□□□ 0.953e-6■■■□□ 16.5
AARSP49588 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.98■□□□□ 0.953e-6■■■□□ 16.5
AARSP49588 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.75■□□□□ 0.913e-6■■■□□ 16.5
AARSP49588 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.92■□□□□ 0.623e-6■■■□□ 16.5
AARSP49588 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.3■□□□□ 0.523e-6■■■□□ 16.5
Retrieved 100 of 8,200 protein–RNA pairs in 51.1 ms