Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 AP004607.4-201ENST00000530158 1459 ntBASIC18.18■□□□□ 0.5
CX3CR1P49238 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.18■□□□□ 0.5
CX3CR1P49238 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CX3CR1P49238 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 AC121338.2-201ENST00000622535 1744 ntBASIC18.18■□□□□ 0.5
CX3CR1P49238 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CX3CR1P49238 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.17■□□□□ 0.5
CX3CR1P49238 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CX3CR1P49238 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.17■□□□□ 0.5
CX3CR1P49238 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CX3CR1P49238 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CX3CR1P49238 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CX3CR1P49238 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CX3CR1P49238 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.16■□□□□ 0.5
CX3CR1P49238 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.16■□□□□ 0.5
CX3CR1P49238 AC008175.2-201ENST00000612840 297 ntBASIC18.16■□□□□ 0.5
CX3CR1P49238 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CX3CR1P49238 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
CX3CR1P49238 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CX3CR1P49238 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.16■□□□□ 0.5
CX3CR1P49238 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.16■□□□□ 0.5
CX3CR1P49238 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CX3CR1P49238 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
CX3CR1P49238 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CX3CR1P49238 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.15■□□□□ 0.5
CX3CR1P49238 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.15■□□□□ 0.5
CX3CR1P49238 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CX3CR1P49238 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CX3CR1P49238 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.14■□□□□ 0.5
CX3CR1P49238 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CX3CR1P49238 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.14■□□□□ 0.49
CX3CR1P49238 LINC01521-201ENST00000504184 1943 ntBASIC18.14■□□□□ 0.49
CX3CR1P49238 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CX3CR1P49238 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.14■□□□□ 0.49
CX3CR1P49238 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CX3CR1P49238 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.14■□□□□ 0.49
CX3CR1P49238 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.14■□□□□ 0.49
CX3CR1P49238 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 LINC02228-203ENST00000641970 1355 ntBASIC18.14■□□□□ 0.49
CX3CR1P49238 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CX3CR1P49238 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.14■□□□□ 0.49
CX3CR1P49238 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CX3CR1P49238 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.14■□□□□ 0.49
CX3CR1P49238 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 POU5F1P4-201ENST00000413175 1085 ntBASIC18.13■□□□□ 0.49
CX3CR1P49238 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms