Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC1A6P48664 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC1A6P48664 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 AC009237.3-201ENST00000393279 1427 ntBASIC20.36■□□□□ 0.85
SLC1A6P48664 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A6P48664 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A6P48664 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A6P48664 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A6P48664 AC133561.4-201ENST00000566112 224 ntBASIC20.36■□□□□ 0.85
SLC1A6P48664 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.36■□□□□ 0.85
SLC1A6P48664 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC1A6P48664 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A6P48664 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SLC1A6P48664 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A6P48664 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A6P48664 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A6P48664 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SLC1A6P48664 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A6P48664 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC1A6P48664 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A6P48664 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A6P48664 AC055733.4-201ENST00000638462 1354 ntBASIC20.34■□□□□ 0.85
SLC1A6P48664 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 BX005040.4-201ENST00000637145 1518 ntBASIC20.34■□□□□ 0.85
SLC1A6P48664 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC1A6P48664 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC1A6P48664 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A6P48664 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A6P48664 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A6P48664 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A6P48664 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A6P48664 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC1A6P48664 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SLC1A6P48664 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A6P48664 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A6P48664 AC099778.1-201ENST00000568593 1911 ntBASIC20.33■□□□□ 0.85
SLC1A6P48664 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A6P48664 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A6P48664 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A6P48664 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A6P48664 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A6P48664 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A6P48664 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A6P48664 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC1A6P48664 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A6P48664 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC1A6P48664 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A6P48664 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A6P48664 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A6P48664 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
SLC1A6P48664 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SLC1A6P48664 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.32■□□□□ 0.84
SLC1A6P48664 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SLC1A6P48664 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A6P48664 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A6P48664 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms