Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARCN1P48444 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARCN1P48444 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARCN1P48444 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ARCN1P48444 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.77■□□□□ 0.92
ARCN1P48444 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ARCN1P48444 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARCN1P48444 AC004854.2-201ENST00000608450 1441 ntBASIC20.77■□□□□ 0.91
ARCN1P48444 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ARCN1P48444 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ARCN1P48444 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ARCN1P48444 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ARCN1P48444 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ARCN1P48444 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.76■□□□□ 0.91
ARCN1P48444 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.76■□□□□ 0.91
ARCN1P48444 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.76■□□□□ 0.91
ARCN1P48444 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.76■□□□□ 0.91
ARCN1P48444 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.76■□□□□ 0.91
ARCN1P48444 RARRES2P11-201ENST00000635158 484 ntBASIC20.76■□□□□ 0.91
ARCN1P48444 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARCN1P48444 KRT16P2-201ENST00000414673 1423 ntBASIC20.76■□□□□ 0.91
ARCN1P48444 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.76■□□□□ 0.91
ARCN1P48444 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ARCN1P48444 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
ARCN1P48444 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ARCN1P48444 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
ARCN1P48444 LINC01521-201ENST00000504184 1943 ntBASIC20.75■□□□□ 0.91
ARCN1P48444 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.75■□□□□ 0.91
ARCN1P48444 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.75■□□□□ 0.91
ARCN1P48444 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.75■□□□□ 0.91
ARCN1P48444 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ARCN1P48444 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 AC011484.1-201ENST00000377652 1995 ntBASIC20.75■□□□□ 0.91
ARCN1P48444 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.75■□□□□ 0.91
ARCN1P48444 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 LINC01006-201ENST00000333319 2292 ntBASIC20.75■□□□□ 0.91
ARCN1P48444 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARCN1P48444 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARCN1P48444 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.74■□□□□ 0.91
ARCN1P48444 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARCN1P48444 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARCN1P48444 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARCN1P48444 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.74■□□□□ 0.91
ARCN1P48444 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.74■□□□□ 0.91
ARCN1P48444 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.74■□□□□ 0.91
ARCN1P48444 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.74■□□□□ 0.91
ARCN1P48444 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARCN1P48444 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARCN1P48444 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.73■□□□□ 0.91
ARCN1P48444 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
ARCN1P48444 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.73■□□□□ 0.91
ARCN1P48444 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.73■□□□□ 0.91
ARCN1P48444 SLC7A5P2-201ENST00000553010 536 ntBASIC20.73■□□□□ 0.91
ARCN1P48444 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.73■□□□□ 0.91
ARCN1P48444 AP001160.3-201ENST00000601484 763 ntBASIC20.73■□□□□ 0.91
ARCN1P48444 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.73■□□□□ 0.91
ARCN1P48444 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARCN1P48444 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.73■□□□□ 0.91
ARCN1P48444 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARCN1P48444 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ARCN1P48444 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ARCN1P48444 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.72■□□□□ 0.91
ARCN1P48444 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARCN1P48444 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.72■□□□□ 0.91
ARCN1P48444 AC007225.1-201ENST00000566331 1836 ntBASIC20.72■□□□□ 0.91
ARCN1P48444 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.72■□□□□ 0.91
ARCN1P48444 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.72■□□□□ 0.91
ARCN1P48444 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.72■□□□□ 0.91
ARCN1P48444 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ARCN1P48444 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms