Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.4■■■□□ 2.62
KDM5CP41229 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
KDM5CP41229 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
KDM5CP41229 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.39■■■□□ 2.62
KDM5CP41229 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.39■■■□□ 2.62
KDM5CP41229 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC31.39■■■□□ 2.62
KDM5CP41229 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.39■■■□□ 2.62
KDM5CP41229 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.39■■■□□ 2.62
KDM5CP41229 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KDM5CP41229 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.39■■■□□ 2.62
KDM5CP41229 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC31.39■■■□□ 2.62
KDM5CP41229 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
KDM5CP41229 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
KDM5CP41229 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
KDM5CP41229 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.39■■■□□ 2.61
KDM5CP41229 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC31.38■■■□□ 2.61
KDM5CP41229 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KDM5CP41229 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KDM5CP41229 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
KDM5CP41229 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KDM5CP41229 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
KDM5CP41229 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC31.38■■■□□ 2.61
KDM5CP41229 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
KDM5CP41229 C11orf96-202ENST00000528572 1834 ntBASIC31.38■■■□□ 2.61
KDM5CP41229 MIR4785-201ENST00000585005 73 ntBASIC31.38■■■□□ 2.61
KDM5CP41229 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
KDM5CP41229 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.37■■■□□ 2.61
KDM5CP41229 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 AC239809.2-201ENST00000415381 517 ntBASIC31.37■■■□□ 2.61
KDM5CP41229 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.37■■■□□ 2.61
KDM5CP41229 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.37■■■□□ 2.61
KDM5CP41229 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
KDM5CP41229 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
KDM5CP41229 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
KDM5CP41229 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
KDM5CP41229 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
KDM5CP41229 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
KDM5CP41229 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM5CP41229 TSPY15P-201ENST00000457163 923 ntBASIC31.34■■■□□ 2.61
KDM5CP41229 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
KDM5CP41229 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
KDM5CP41229 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.34■■■□□ 2.61
KDM5CP41229 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
KDM5CP41229 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
KDM5CP41229 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KDM5CP41229 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KDM5CP41229 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KDM5CP41229 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC31.33■■■□□ 2.61
KDM5CP41229 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.33■■■□□ 2.61
KDM5CP41229 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
KDM5CP41229 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
KDM5CP41229 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.32■■■□□ 2.6
KDM5CP41229 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KDM5CP41229 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KDM5CP41229 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KDM5CP41229 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
KDM5CP41229 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.32■■■□□ 2.6
KDM5CP41229 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KDM5CP41229 KRT17P2-201ENST00000300992 1314 ntBASIC31.31■■■□□ 2.6
KDM5CP41229 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.31■■■□□ 2.6
KDM5CP41229 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
KDM5CP41229 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.31■■■□□ 2.6
KDM5CP41229 AC133561.5-201ENST00000635547 218 ntBASIC31.31■■■□□ 2.6
KDM5CP41229 AC087633.2-202ENST00000565166 1439 ntBASIC31.31■■■□□ 2.6
KDM5CP41229 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
KDM5CP41229 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
KDM5CP41229 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.31■■■□□ 2.6
KDM5CP41229 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.31■■■□□ 2.6
KDM5CP41229 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms