Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SOX6P35712 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SOX6P35712 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX6P35712 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SOX6P35712 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SOX6P35712 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX6P35712 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.56■□□□□ 0.56
SOX6P35712 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
SOX6P35712 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
SOX6P35712 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX6P35712 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX6P35712 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX6P35712 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX6P35712 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX6P35712 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX6P35712 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX6P35712 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
SOX6P35712 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SOX6P35712 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SOX6P35712 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SOX6P35712 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.54■□□□□ 0.56
SOX6P35712 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 AC112907.3-201ENST00000577781 2400 ntBASIC18.54■□□□□ 0.56
SOX6P35712 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
SOX6P35712 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SOX6P35712 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX6P35712 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.54■□□□□ 0.56
SOX6P35712 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SOX6P35712 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SOX6P35712 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 SNX5-217ENST00000606557 1087 ntBASIC18.53■□□□□ 0.56
SOX6P35712 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SOX6P35712 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SOX6P35712 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SOX6P35712 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.53■□□□□ 0.56
SOX6P35712 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.53■□□□□ 0.56
SOX6P35712 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX6P35712 AC005703.6-201ENST00000623265 1329 ntBASIC18.52■□□□□ 0.56
SOX6P35712 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SOX6P35712 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX6P35712 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.52■□□□□ 0.56
SOX6P35712 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.52■□□□□ 0.56
SOX6P35712 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SOX6P35712 AC098818.2-201ENST00000564925 2320 ntBASIC18.52■□□□□ 0.56
SOX6P35712 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX6P35712 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX6P35712 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SOX6P35712 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SOX6P35712 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SOX6P35712 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.51■□□□□ 0.55
SOX6P35712 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.51■□□□□ 0.55
SOX6P35712 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SOX6P35712 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX6P35712 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms