Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RFC1P35251 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RFC1P35251 KRT19P1-201ENST00000405746 1186 ntBASIC21.83■■□□□ 1.09
RFC1P35251 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC1P35251 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC1P35251 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC1P35251 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.83■■□□□ 1.08
RFC1P35251 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.08
RFC1P35251 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC1P35251 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
RFC1P35251 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC1P35251 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC1P35251 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC1P35251 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC1P35251 KRT18P20-201ENST00000548986 1279 ntBASIC21.82■■□□□ 1.08
RFC1P35251 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RFC1P35251 AC120498.10-201ENST00000621827 505 ntBASIC21.82■■□□□ 1.08
RFC1P35251 RARRES2P11-201ENST00000635158 484 ntBASIC21.82■■□□□ 1.08
RFC1P35251 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC1P35251 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.82■■□□□ 1.08
RFC1P35251 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC1P35251 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RFC1P35251 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC1P35251 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.8■■□□□ 1.08
RFC1P35251 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 AC121338.2-201ENST00000622535 1744 ntBASIC21.8■■□□□ 1.08
RFC1P35251 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RFC1P35251 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RFC1P35251 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.8■■□□□ 1.08
RFC1P35251 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC1P35251 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RFC1P35251 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC1P35251 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RFC1P35251 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.79■■□□□ 1.08
RFC1P35251 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.79■■□□□ 1.08
RFC1P35251 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RFC1P35251 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.79■■□□□ 1.08
RFC1P35251 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.79■■□□□ 1.08
RFC1P35251 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.79■■□□□ 1.08
RFC1P35251 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RFC1P35251 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC1P35251 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.79■■□□□ 1.08
RFC1P35251 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.79■■□□□ 1.08
RFC1P35251 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 KRT18P5-201ENST00000436075 1291 ntBASIC21.78■■□□□ 1.08
RFC1P35251 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.78■■□□□ 1.08
RFC1P35251 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.78■■□□□ 1.08
RFC1P35251 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFC1P35251 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 AC006128.1-201ENST00000624704 1661 ntBASIC21.78■■□□□ 1.08
RFC1P35251 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.78■■□□□ 1.08
RFC1P35251 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.77■■□□□ 1.08
RFC1P35251 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.77■■□□□ 1.08
RFC1P35251 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms