Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCKBRP32239 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCKBRP32239 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.93■□□□□ 0.78
CCKBRP32239 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCKBRP32239 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.93■□□□□ 0.78
CCKBRP32239 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
CCKBRP32239 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.93■□□□□ 0.78
CCKBRP32239 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCKBRP32239 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
CCKBRP32239 AC060766.5-201ENST00000590539 871 ntBASIC19.93■□□□□ 0.78
CCKBRP32239 AL589743.5-201ENST00000616611 1050 ntBASIC19.93■□□□□ 0.78
CCKBRP32239 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCKBRP32239 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCKBRP32239 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCKBRP32239 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 MCRIP2P1-201ENST00000394346 511 ntBASIC19.92■□□□□ 0.78
CCKBRP32239 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.92■□□□□ 0.78
CCKBRP32239 AL158047.1-201ENST00000445918 881 ntBASIC19.92■□□□□ 0.78
CCKBRP32239 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.92■□□□□ 0.78
CCKBRP32239 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 HLA-B-256ENST00000639848 1089 ntBASIC19.92■□□□□ 0.78
CCKBRP32239 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCKBRP32239 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CCKBRP32239 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCKBRP32239 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.91■□□□□ 0.78
CCKBRP32239 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CCKBRP32239 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCKBRP32239 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 AC073648.6-201ENST00000641589 218 ntBASIC19.91■□□□□ 0.78
CCKBRP32239 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.91■□□□□ 0.78
CCKBRP32239 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.91■□□□□ 0.78
CCKBRP32239 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.91■□□□□ 0.78
CCKBRP32239 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CCKBRP32239 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCKBRP32239 AC127496.7-201ENST00000625110 1798 ntBASIC19.9■□□□□ 0.78
CCKBRP32239 AL117328.2-201ENST00000624617 1940 ntBASIC19.9■□□□□ 0.78
CCKBRP32239 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.9■□□□□ 0.78
CCKBRP32239 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.9■□□□□ 0.78
CCKBRP32239 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.9■□□□□ 0.78
CCKBRP32239 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCKBRP32239 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.9■□□□□ 0.78
CCKBRP32239 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.9■□□□□ 0.78
CCKBRP32239 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCKBRP32239 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCKBRP32239 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCKBRP32239 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCKBRP32239 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.89■□□□□ 0.77
CCKBRP32239 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.89■□□□□ 0.77
CCKBRP32239 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.89■□□□□ 0.77
CCKBRP32239 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
CCKBRP32239 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCKBRP32239 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCKBRP32239 AC233723.2-201ENST00000623798 2106 ntBASIC19.88■□□□□ 0.77
CCKBRP32239 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.88■□□□□ 0.77
CCKBRP32239 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCKBRP32239 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.88■□□□□ 0.77
CCKBRP32239 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CCKBRP32239 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
CCKBRP32239 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCKBRP32239 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCKBRP32239 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.87■□□□□ 0.77
CCKBRP32239 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.87■□□□□ 0.77
CCKBRP32239 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.87■□□□□ 0.77
CCKBRP32239 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCKBRP32239 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.87■□□□□ 0.77
CCKBRP32239 AC008403.3-201ENST00000598924 454 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms